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Hi,
please use the latest Version of the SUM 2.0 SP07 Patch which is PL09 or a higher Version.
Note 2790229 – Central Note – Software Update Manager 2.0 SP07 [lmt_023]
Note 2489550 -EU_CLONE_MIG_UT_RUN phase fails with "write_to_pipe" error during upgrade
Note 2240098 - Wrongdata / missing data after unclustering tables
The Problem is already fixed since a while. If you are patching within the same SP the PL level, simply stop the SAPup and overwrite the existing binaries. It will not overwrite your own files from the DMO run.
If you want to use the latest Version of the SUM/DMO like SP08 PL01 or higher, then I would recommend to start over again. So in your case use the latest PL Version for SUM 2.0 SP07
Nevertheless check the Document - SAP First Guidance – Using the new DMO to migrate to BW on HANA for Keywords like pipe or cluster
Best Regards Roland
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